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Title: Liangti Dai — Radcliffe Department of Medicine
Description: Liangti Dai - DPhil Student
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Texto: Liangti Dai — Radcliffe Department of Medicine Cookies on this website We use cookies to ensure that we give you the best experience on our website. If you click 'Continue' we'll assume that you are happy to receive all cookies and you won't see this message again. Click 'Find out more' for information on how to change your cookie settings. Continue Find out more Site Map Accessibility Cookies Contact us Log in Home About us About us Our Divisions Our Clinical Facilities and MRC Units Working at RDM Athena SWAN News Seminars Locations and contact details Research People Study with us Work with us Current vacancies Novo Nordisk - Oxford Fellowships For Staff Contacts, travel and maps Personnel Finance, Grants and Funding Facilities, IT and Health and Safety Graduate Studies Career Development Athena SWAN Communications and public engagement Search People Liangti Dai Contact information Email liangti.dai@linacre.ox.ac.uk Research groups Lunter Group: Functional Genomics & Machine Learning Colleges Linacre College Liangti Dai DPhil Student I am a DPhil student in Interdisciplinary Bioscience doctoral training program under the supervision of Gerton Lunter. I am interested in applying computational approaches to find out the hidden information related to gene regulation from sequencing data. Specifically, my research focuses on improving the downstream statistical analysis strategies for single-cell ATAC-seq (scATAC-seq) data and using machine learning to understand the cell-specific effects of non-coding genomic variants.   Single-cell sequencing has improved the resolution of various kind of sequencing to individual cell level. While the more widely-used scRNA-seq is limited to information within coding regions, scATAC-seq reveals cell-to-cell heterogeneity of DNA accessibility across the entire genome, which provides valuable data with which to study gene regulatory mechanisms at individual cell level. However, the current downstream analysis of scATAC-seq is far from satisfaction. We aim to generate an optimized and comprehensive pipeline for scATAC-seq analysis, extract cell-specific information from transcription profile, and develop machine learning models to predict cell-specific patterns of genome-wide DNA accessibility. Before coming to Oxford, I completed my undergraduate in Biological Sciences from Nankai University, China in 2018. Through the iGEM project and my final-year project (Investigation on candidate regulatory proteins of the Hippo Signaling Pathway), I gradually formed interest in genomics with the application of mathematical modelling and statistics, which brought me to postgraduate studies in bioinformatics. © 2020 Radcliffe Department of Medicine Freedom of Information Privacy Policy Copyright Statement Accessibility Statement Site Map Accessibility Cookies Contact us Log in About us Our Divisions Investigative Medicine Division Nuffield Division of Clinical Laboratory Sciences Oxford Centre for Diabetes, Endocrinology and Metabolism Division of Cardiovascular Medicine MRC Weatherall Institute of Molecular Medicine MRC Weatherall Institute of Molecular Medicine Our Clinical Facilities and MRC Units Acute Vascular Imaging Centre Cardiovascular Clinical Research Facility Oxford Centre for Clinical Magnetic Resonance Research Working at RDM Equal career opportunities and flexible working Career 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269 www.rdm.ox.ac.uk/people/roy-drissen
270 www.rdm.ox.ac.uk/people/edward-drydale
271 www.rdm.ox.ac.uk/people/yue-du
272 www.rdm.ox.ac.uk/people/claire-duff
273 www.rdm.ox.ac.uk/people/samuel-dunkley
274 www.rdm.ox.ac.uk/people/pamela-dyson
275 www.rdm.ox.ac.uk/people/james-early
276 www.rdm.ox.ac.uk/people/james-eaton
277 www.rdm.ox.ac.uk/people/carol-eaton
278 www.rdm.ox.ac.uk/people/laurienne-gardner
279 www.rdm.ox.ac.uk/people/christian-eggeling
280 www.rdm.ox.ac.uk/people/mehroz-ehsan
281 www.rdm.ox.ac.uk/people/jane-ellis
282 www.rdm.ox.ac.uk/people/hanif-esmail
283 www.rdm.ox.ac.uk/people/lise-estcourt
284 www.rdm.ox.ac.uk/people/rachel-etherington
285 www.rdm.ox.ac.uk/people/mark-evans
286 www.rdm.ox.ac.uk/people/tracey-evans
287 www.rdm.ox.ac.uk/people/martyn-ezra
288 www.rdm.ox.ac.uk/people/anne-farmer
289 www.rdm.ox.ac.uk/people/martin-farrall
290 www.rdm.ox.ac.uk/people/oliver-featherstone
291 www.rdm.ox.ac.uk/people/martin-fellermeyer
292 www.rdm.ox.ac.uk/people/candida-fenton
293 www.rdm.ox.ac.uk/people/david-ferguson
294 www.rdm.ox.ac.uk/people/joao-ferreira-fernandes
295 www.rdm.ox.ac.uk/people/vanessa-ferreira
296 www.rdm.ox.ac.uk/people/lucy-field
297 www.rdm.ox.ac.uk/people/alison-fletcher
298 www.rdm.ox.ac.uk/people/gary-ford
299 www.rdm.ox.ac.uk/people/nicholas-fordham
300 www.rdm.ox.ac.uk/people/helena-francis
301 www.rdm.ox.ac.uk/people/john-frankland
302 www.rdm.ox.ac.uk/people/rachel-franklin
303 www.rdm.ox.ac.uk/people/joe-frost
304 www.rdm.ox.ac.uk/people/xiaopeng-fu
305 www.rdm.ox.ac.uk/people/lars-fugger
306 www.rdm.ox.ac.uk/people/lars-fugger-1
307 www.rdm.ox.ac.uk/people/tudor-fulga
308 www.rdm.ox.ac.uk/people/grigore-aristide-gafencu
309 www.rdm.ox.ac.uk/people/kezia-gaitskell
310 www.rdm.ox.ac.uk/people/parag-gajendragadkar-1
311 www.rdm.ox.ac.uk/people/silvia-galiani
312 www.rdm.ox.ac.uk/people/toby-gamlen-1
313 www.rdm.ox.ac.uk/people/jonathan-gamwell
314 www.rdm.ox.ac.uk/people/wei-gan
315 www.rdm.ox.ac.uk/people/weigan
316 www.rdm.ox.ac.uk/people/syed-gardezi
317 www.rdm.ox.ac.uk/people/tina-garland
318 www.rdm.ox.ac.uk/people/katja-gehmlich
319 www.rdm.ox.ac.uk/people/cristina-di-genua
320 www.rdm.ox.ac.uk/people/charlotte-george
321 www.rdm.ox.ac.uk/people/emily-georgiades
322 www.rdm.ox.ac.uk/people/sahar-ghaffari
323 www.rdm.ox.ac.uk/people/richard-gibbons
324 www.rdm.ox.ac.uk/people/maria-giebler
325 www.rdm.ox.ac.uk/people/deborah-gill
326 www.rdm.ox.ac.uk/people/anne-gilligan
327 www.rdm.ox.ac.uk/people/anna-gloyn
328 www.rdm.ox.ac.uk/people/anna-gluck
329 www.rdm.ox.ac.uk/people/anuj-goel
330 www.rdm.ox.ac.uk/people/tomas-goncalves
331 www.rdm.ox.ac.uk/people/claudia-gonzalez-lopez
332 www.rdm.ox.ac.uk/people/sarah-gooding
333 www.rdm.ox.ac.uk/people/anne-goriely



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